BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016E08LP1|AL427025
(846 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1495 1674 0.0
>3x_Contig1495
Length = 10008
Score = 1674 bits (844), Expect = 0.0
Identities = 845/846 (99%)
Strand = Plus / Minus
Query: 1 ttgaatccgcaatgggtggtacatccggtggtttgtactctatattcatttcgggccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6926 ttgaatccgcaatgggtggtacatccggtggtttgtactctatattcatttcgggccttt 6867
Query: 61 caaaaggaattattgaacaatgcggagaaaatgatgcggtggacaaagaagccttcgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6866 caaaaggaattattgaacaatgcggagaaaatgatgcggtggacaaagaagccttcgcca 6807
Query: 121 aatcgctagaagttgcatacgagacattgtgtaaatatactagagctaggccaggtgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6806 aatcgctagaagttgcatacgagacattgtgtaaatatactagagctaggccaggtgatt 6747
Query: 181 ctactatgatcgatgccttggagccattcgtgaaagagtttagttcaactcaggacttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6746 ctactatgatcgatgccttggagccattcgtgaaagagtttagttcaactcaggacttcc 6687
Query: 241 ataaggccttttccaaggcggaaggaggtgcagaatctacaggaaacttagaagccaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6686 ataaggccttttccaaggcggaaggaggtgcagaatctacaggaaacttagaagccaagt 6627
Query: 301 tcggccgtgcatcttacgtggaagacactgaagcaattccggacccaggagctatcggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6626 tcggccgtgcatcttacgtggaagacactgaagcaattccggacccaggagctatcggtt 6567
Query: 361 tggtcgaattcctcaggggtgttgattccaaattgtagattcattttcaaatgagctgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6566 tggtcgaattcctcaggggtgttgattccaaattgtagattcattttcaaatgagctgcc 6507
Query: 421 tcctttattctttccacctagttattattttataacaaactatatacagcttcctacatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6506 tcctttattctttccacctagttattattttataacaaactatatacagcttcctacatt 6447
Query: 481 aaccaaatttatgacctagcggtaattgcagtatcatacattgttcctccggcaacaggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6446 aaccaaatttatgacctagcggtaattgcagtatcatacattgttcctccggcaacaggg 6387
Query: 541 gggtgggcctcgacctgatagttcttcgtgtgtaaaaactgtctcttttccgttcactcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6386 gggtgggcctcgacctgatagttcttcgtgtgtaaaaactgtctcttttccgttcactcc 6327
Query: 601 cccatcttacctcttgtcaacgtgacgcgaattggaaactttactagaaatgaaaatgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6326 cccatcttacctcttgtcaacgtgacgcgaattggaaactttactagaaatgaaaatgaa 6267
Query: 661 aaatcgccaaagtgtttaagatgttgttaaaacatgaacaaataagaagacatatgaaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6266 aaatcgccaaagtgtttaagatgttgttaaaacatgaacaaataagaagacatatgaaac 6207
Query: 721 cgttaacggtaggcagagttgttagcccatagtttacgttagacaggtcagtattactga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6206 cgttaacggtaggcagagttgttagcccatagtttacgttagacaggtcagtattactga 6147
Query: 781 aatctagtgatcttcgtcttggatacctactttttatttcttatattgggrtagtggaga 840
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 6146 aatctagtgatcttcgtcttggatacctactttttatttcttatattgggatagtggaga 6087
Query: 841 atgagt 846
||||||
Sbjct: 6086 atgagt 6081
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5882
Number of Sequences: 1807
Number of extensions: 5882
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 846
length of database: 10,358,551
effective HSP length: 16
effective length of query: 830
effective length of database: 10,329,639
effective search space: 8573600370
effective search space used: 8573600370
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)